Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891559.1_cds_XP_016446364.1_41226
CDS Infomation

[gene=LOC107771504] [db_xref=GeneID:107771504] [protein=probable protein phosphatase 2C 43] [protein_id=XP_016446364.1] [location=join(8385..8691,9842..10206,11119..11355,11465..11734)] [gbkey=CDS]
Sequence

ATGTTTTCCTGGCTGATAAGGACGGTATCAGCATGTTGGCGACCATTGAGTCGATATGTC
CCTATGAGCAAGGATGAAGATGATGTTTTTGTGGGAGGTGAAGATGATGTGCTTTTATGG
TGTAGAGACCTTGAGAAACATTCATGTGGGGAGTTTTCTTTTGCTGTAGTCCAAGCTAAT
TCAGTACTTGAAGATCATAGCCAAGTTGATACTGGTCGTGAAGCTACTTTTGTTGCGATT
TATGATGGTCATGGTGGCCCTGAGGCTTCAAGATTTGTCCGTGATCACCTTTTCCTGCAT
TTAATTAGGCTTGCCCGAGAAAATGGAACAATAGATGAAGAAGTGCTTAAAAATGCGTTC
GCTGCAACTGAAGTTGGCTTTCTTTCTCTTGTGAGAAGGGCATTTGGTATTACACCATTA
ATTGCAACTAAGGGTTGCTGCTGTCTGGTTGGTGTTATCTGGAAAAGGACGTTGTATGTT
GCTAACCTTGGCGATTCTAGAGCAGTATTAGGTCATATAGGGAGATCAAATAAAATTTTT
GCTGAGCAATTGACCAAGGATCATAATGCCAGTATCGAGGAGGTTAGGAAGGAACTGATG
TCGTTGCACCCAGACGATTCACGCATTGTGGTTAATGTCAATGGAGCTTGGCGTGTTAAA
GGCATCATACAGGTATCTAGATCAATTGGAGATGCATATCTGAAGAAGCCAGAGTTTGCT
GTTGGTCCAGCTTACCCACGATTCCATCTTAAAGAACCACTTATTCGGCCAGTGCTAAGA
GCTGATCCATCTGTATGTTCAAGAAACTTACAACCCGGTGATAGATTTCTTATATTTGCT
TCTGACGGGCTGTGGGAACTCATAAGCAATCAAAAGGCTGTCGAGATTGTGCATAATAAC
CCAAGAGAGGGCATCGCAAGAAGACTTGTTATATCAGCCCTGGATGAGGCAGCAAGGAGA
AGGAAGTTGAAGTATGATGACCTTAAGAAGTATGACAAGGGTGCGAGGAGGGCCTTTCAT
GATGATATAACAGTTGTTGTCATCTTTATAGATCATGAGATGTTGGAAGGAAAACAATCT
GTGCCCGAACTGTCAGTTCGAGGATTTATAGATACTCATGGACCATCAGATTTCAATATC
CTCCAAGAGGTTGCTATGAAGACAAATTCTCTCAAGTGA

Peptide Sequence

PEP ID

XP_016446364.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 43 [Nicotiana tabacum]
Sequence

MFSWLIRTVSACWRPLSRYVPMSKDEDDVFVGGEDDVLLWCRDLEKHSCGEFSFAVVQAN
SVLEDHSQVDTGREATFVAIYDGHGGPEASRFVRDHLFLHLIRLARENGTIDEEVLKNAF
AATEVGFLSLVRRAFGITPLIATKGCCCLVGVIWKRTLYVANLGDSRAVLGHIGRSNKIF
AEQLTKDHNASIEEVRKELMSLHPDDSRIVVNVNGAWRVKGIIQVSRSIGDAYLKKPEFA
VGPAYPRFHLKEPLIRPVLRADPSVCSRNLQPGDRFLIFASDGLWELISNQKAVEIVHNN
PREGIARRLVISALDEAARRRKLKYDDLKKYDKGARRAFHDDITVVVIFIDHEMLEGKQS
VPELSVRGFIDTHGPSDFNILQEVAMKTNSLK

Transcript Sequence

Gene sequence data has not been registered.